Preface
- the Sea and Genesis of Life
Any
consideration of the geological history of earth as it pertains
to the genesis and evolution of life, that is, to paleobiology,
must hold the sea as centric. Life began in the sea, and most
extant life
yet exists in the sea. The sea contains an incomprehensible diversity
of life, mostly still undiscovered or described, ranging across
all the domains of life. The sea is absolutely brimming with microscopic
life, including bacteria that make their living by a constellation
of different metabolic processes, and the Archaeans, among which
are the extremophiles living in vents at temperatures well above
the boiling point of water.
The
sea was the mother of all life beginning some 3.8 billion years ago, and remains
so today. The land-based animals each carry with them a miniature ocean, pulsing
in their cells and circulatory systems. All life, including human, could be viewed
as bags sea water
containing the same mineral constituency as the ocean together with a dynamic
dispersion of molecules that perform the biological processes that constitute
life.
In
all living cells - proteins answer for both form and function.
Proteins are the active elements of cells that aid and control
the chemical reactions that make the cell work. They receive signals
from outside of the cell. They control the processes by which
proteins are made
from the instructions in the genes. They also form the scaffolding
that gives cells their shape and as well
as parts of the linkages that stick cells together into tissues
and organs. A protein's shape determines its function, which,
in turn, depends on its water-hating (hydrophobic) properties
- to work proteins must be immersed in a miniature sea within
the cell that does not greatly differ from the sea from whence
it came. Life came from the sea, and the sea sustains life on
earth, especially the many microbes that recycle the fundamental
elements from which proteins are constructed (for example in
the nitrogen cycle)
It
is believed that the earth formed after the Big
Bang some 4 ½ billion years ago (4500 mya), an almost
incomprehension amount of time. It was some 4 billion years afterwards,
with some exceptions, that animals first left their mark in the
fossil record. But it was during this Precambrian period when
profound events occurred, leading ultimately to "life"
as we know it today. From 4500 to 3800 mya (the Hadean) the earth
was indeed a hostile place. During this period the sun formed
by gravitational compaction, and eventually reached the temperature
and pressure conditions for nuclear fusion. Other particles coalesced
under gravity to form continually growing planets. The oldest
rocks on earth (3.8 bya) were formed through the cooling of the
theretofore, molten Earth. Science is unaware that life existed
during the Hadean time, but the prerequisite ingredients for life
to emerge were in production. If life did arise during the Hadean,
it did so in a truly hellish environment.
The
atmosphere that existed during Archean time would be toxic
to
most extant life on our planet. Also, rocks were just beginning
to form at the crust of the earth. It is believed that life
on
earth made its appearance in the seas during Archaean
time. The first life is believed to be the
Eubacteria
(i.e., bacteria), single-celled prokaryotic
organisms with no DNA-containing
Nucleus. The most prevalent theory is that the Eubacteria are
ancestral to the Archaea, only identified as a distinct domain
of life in the
1970's. Domain Archaea include organisms that can exist, and
maybe
are the only organisms that can exist, in extremely hostile environments,
such as thermal vents and hypersaline water. However, not all
Archaeans are extremophiles, and, in fact, this domain is extremely
diverse, and only recently being studied using genomic and
proteomic
methods. The earliest primitive bacteria obtained energy through
chemosynthesis (ingestion of organic molecules). They produced
the oldest
fossils
that date to about 3500 mya, and are known as bacterial microfossils.
Discovered in the 1970s in western Australia, these earliest
fossils
express what appear to be chemical signs of delicate chains of
microbes that appear exactly like living blue-green algae (otherwise
known as cyanobacteria). For billions of years, these bacteria
formed extensive slimy carpets in shallow coastal waters, and
before the end of Achaean-time 2.5 bya had also formed a thin
crust on land. Known as stromatolites,
these
accretionary growth structures produced by the prokaryotes,
and
also possibly Arachaea
and primitive Eukaryotes, became increasingly
abundant during the Archaean, a fact of critical importance
to
the later evolution of life. However, an alternate hypothesis
postulates that eukaryotes may have appeared in late Archaean
time. Ancient shales of northwest Australia dated with uranium
and lead to 2700 mya contain microscopic traces of oil containing
sterols. Since eukaryotes are the only organisms on Earth that
can make these molecules, these shale's support the theory that
amoeba-like eukaryotes may have appeared early in life's history.
Stromatolitic structures span the Precambrian and extend to
modern
time, though they are currently limited to several isolated environments.
While science generally can not determine the producing organism
or organisms, stromatolite can indeed be beautiful expressions
of the most ancient life on earth.
The
origins of all modern cells occurred in deep time of the Archaean.
Sequence comparisons of proteins thousands of different prokaryotes,
together with assumptions of the slow mutation rate of prokaryotes
lead to estimates that major classes of primitive microbes
(chemotrophs and photosynthetic autotrophs) fused
together
more than
2.5
billion
years ago in a process called endosymbiosis. This
endosymbiosis, or symbiotic merging of two cells, enabled the evolution
of a highly stable
and successful
organisms
with
the capacity
to use energy from sunlight through photosynthesis. Perhaps no
event is more important to the evolution of life of earth. Further
evolution led to increasing diversity of photosynthetic organisms
producing oxygen as a byproduct.
The resulting oxygenation of Earth's atmosphere profoundly affected
the evolution of life, leading to more complex organisms that
consumed oxygen, which were the ancestors of all modern oxygen-breathing
creatures including humans.
Proterozoic
Era (2500 to 544 million years ago)
Domain:
Eubacteria Phylum:
Cyanobacteria Genus: Anabaena
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The
Proterozoic, 2.5 bya to 544 million years ago (mya), realized
events paramount to the further evolution of life, most notably
the steady buildup of oxygen in the atmosphere. Stable continents
formed. Bacteria and archaean microbes, some able to tolerate
extremely hostile environments, became increasingly abundant.
By about 1.8 bya, eukaryotic
celled animals appear as fossils, These are the organisms
that most people are most familiar with - all animals, plants,
fungi, and protists which share fundamental characteristics such
as cellular organization, biochemistry, and molecular biology.
Cyanobacteria,
photosynthetic Eubacteria that produce oxygen as a metabolism
byproduct may have appeared of early as 3.5 billion years ago,
but became common and widespread in the Proterozoic. The rapid
build-up of oxygen in the atmosphere was primarily owing to their
photosynthetic activity. Hence, cyanobacteria have been paramount
in evolution and ecological change throughout earth's history.
They have been attributed at least in part, because of the intense
energy density of oxygen-burning aerobic metabolism of Eukaryotes,
with the explosion of diversity in the late Precambrian into the
Cambrian (the Cambrian Explosion).
The other great contribution of the cyanobacteria is in the origin
of plants. The chloroplast where plants make food is actually
a cyanobacterium living within the plant's cells.
Regardless
of whether the Eukaryotes with DNA-containing nucleus evolved
in the Arachaen or Proterozic, these ancestors of all plants,
animals and fungi are believed to have obtained their energy
complex
metabolism systems from endosymbiotic bacteria (known as the theory
of endosymbiosis). The cellular organelle mitochondria (and
associated mitachondrial DNA) of animals, the center of aerobic
energy production is believed evolved from aerobic
bacteria. Similarly, and in a separate evolutionary event, chloroplasts
of eukaryotic plants is believed to have evolved from the autotrophic,
photosynthetic cyanobacteria. Fossils that are clearly related
to modern groups start appearing around 1.2 billion years ago,
in the form of a red alga, though recent work suggests the existence
of fossilized filamentous algae in the Vindhya basin dating back
to 1.6 to 1.7 billion years ago.
Besides
endosymbiotic-based
metabolism, the other great evolutionary innovation
of the Eukaryotes that occured in the Proterozoic was the ability
to reproduce sexually, making genetic diversity possible,
and
as a consequence, greatly enhanced the ability to adapt
to and survive environmental changes. Unlike
prokaryotic bacteria that are identical clones, sex enabled
favorable
mutations to persist and amplify in a population's genome,
and for multi-celled, soft-bodied marine organisms (metazoans)
evolve.
The
oldest fossils within Kingdon
Animalia are Vendian age 650 to 544 mya, are found at nearly
30 locations around the world, and are most distinctive. The Ediacara
Hills of Southern Australia, and the Vendian White
Sea Region of Northern Russia are two of the more famous.
Typically, the Vendian or Ediacaran fossils are preserved as thin
impressions on bedding surfaces of fine to medium-grained sedimentary
rocks. Ostensibly, these organisms were very thin, lacked any
minerallized hard parts or well developed organs or organ systems,
and had a quilt-like outer surface. Some uncertainty exists as
to what groups of animals these fossils might represent, and,
in fact, if they were ancestral to the multicellular organisms
that appeared later in the Cambrian.
The so-called Tommotian fauna
(biota) appear near the end of the Proterozoic, immediately preceding
the Cambrian explosion. These
small shelly animals were a prelude to the metazoans with hard
exoskeletons that would rapidly diversify in the Cambrian.
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